I-T2T Genome Assembly, igebe lamahhala
1stI-genomes emibili yerayisi1
Isihloko: Umhlangano kanye nokuqinisekiswa kwe-gap-free gener genomes ye-Xian / Indica Rice yembula imininingwane ekubumbeni kwe-Plant Centromere
DOI:https://doi.org/10.1101/2020.12.24.424073
Isikhathi esithunyelwe: Januwari 01, 2021.
Institute: Huazhong Agricultural University, China
Izinto zokwakha
O. Sativa Xian / IndicaIzinhlobo zeRice Varieties 'zhenhan 97 (ZS97)' kanye 'Minghui 63 (MH63)
Ukuhlehlisa Isu
I-NGS Read + Hifi Read + CLR funda + bionano + hi-c
Idatha:
I-ZS97: 8.34 GB (~ 23x) I-HiFi ifundeka + 48.39 GB (~ 131x) I-CLR ifundwe + 25 GB (~ 69x) ngs + 2 Bionano IrYS Cell
I-MH63: 37.88 GB (~ 103x) Hifi Read + 48.97 GB (~ 132x) I-CLR ifundwe + 28 GB (~ 76x) ngs + 2 Bionano IrYS Cells
Umdwebo 1 genomes ama-gap-free genomes werayisi (MH63 neZS97)
2ndBanana Geneme2
Isihloko: I-telomere-to-telomere galless chromosomes yebhanana usebenzisa ukulandelana kwe-nanopore
DOI:https://doi.org/10.1101/2021.04.16.440017
Isikhathi esithunyelwe: Ephreli 17, 2021.
Institute: Université Paris-Saclay, France
Izinto zokwakha
Double haploidMusa AcuminataisengaphambiliIMalaccensis(Dh-pahang)
Ukuhlehlisa Isu Nemininingwane:
Imodi ye-AEEQ2500 PE250 + minion / Promethotion (93GB, ~ 200x) + Imephu ye-Optical (Dle-1 + BSPQ1)
Ithebula 1 Ukuqhathaniswa kweMusa Acuminata (DH-PAHANG) Genome Assemblies
Umdwebo 2 Musa genomes Architecture Architecture
3rdI-Phaedactyllum tricornitum genome3
Isihloko: I-telomere-to-telomere genome boyP
haeodactyllum tricornitum
DOI:https://doi.org/10.1101/2021.05.04.442596
Isikhathi esithunyelwe: Meyi 04, 2021
Inhlangano: I-Western University, eCanada
Izinto zokwakha
Phaeodactyllum tricornitum(Ukuqoqwa Kwamasiko Kwe-algae ne-protozoa ccap 1055/1)
Ukuhlehlisa Isu Nemininingwane:
1 I-Oxford Nanopore Minion Flow Flow + A 2 × 75 Paticd-End Maild Maild Nextseq 550 Run
Umdwebo 3 ukuhanjiswa komsebenzi we-telomere-to-telomere genome
4thHuman CHM13 Genme4
Isihloko: ukulandelana okuphelele kwe-genome yomuntu
DOI:https://doi.org/10.1101/2021.05.26.445798
Isikhathi esithunyelwe: Meyi 27, 2021
Isikhungo: Izikhungo Zozwelonke Zezempilo (NIH), USA
Izinto zokwakha: I-Cell Line CHM13
Ukuhlehlisa Isu Nemininingwane:
30 × Pacbio Cirnencus Ukulandelana (i-HIFI), 120 × Oxford Nanopore Ultra-Long Ukulandelana kokulandelana, i-100 × illina Pcr-Free Ukulandelana (iLMN), 70 × Mahhala Illung / Arima genomics Hi-C (Hi-CE-CE-C (HIIMA genomics Hi-C (Hi-C), Amamephu we-Bionano Optical, kanye ne-STRAND-SEQ
Ithebula 2 Ukuqhathaniswa kwe-GRCHRK38 ne-T2T-CHM13 Assemblies Human Genome Assemblies
Inkomba
1.sergey nurk et al. Ukulandelana okuphelele kwe-genome yomuntu. I-Biorxiv 2021.05.26.445798; DOI:https://doi.org/10.1101/2021.05.26.445798
2.Caroline Belser et al. I-telomere-to-telomere galless ama-chromosomes e-banana usebenzisa ukulandelana kwe-nanopore. I-Biorxiv 2021.04.16.440017; DOI:https://doi.org/10.1101/2021.04.16.440017
3.Daniel J. giguere et al. I-Telomere-to-telomere genome genome ye-phaeodactyllum tricornutum. I-Biorxiv 2021.05.04.442596; DOI:https://doi.org/10.1101/2021.05.04.442596
Ingoma ye-4.jia-Ming et al. Umhlangano kanye nokuqinisekiswa kwe-gap-free geromes yamahhala ye-XIAN / I-Indica Rice yembula imininingwane ekubumbeni kwe-Plant Centromere. I-Biorxiv 2020.12.24.424073; DOI:https://doi.org/10.1101/2020.12.24.424073
Isikhathi sePosi: Jan-06-2022