Metagenomics (NGS)

Shotgun metagenomics e nang le Illumina ke sesebelisoa se tsebahalang sa ho ithuta ka li-microbiomes ka ho hlophisa DNA ka kotloloho ho tsoa lisampoleng tse rarahaneng, e leng se nolofalletsang ho ithuta ka mefuta e fapaneng ea taxonomic le e sebetsang. Pipe ea BMKCloud metagenomic (NGS) e qala ka taolo ea boleng le kopano ea metagenome, eo liphatsa tsa lefutso li boleloang esale pele le ho kopanngoa ho li-datasets tse sa hlokeng letho tse hlalositsoeng bakeng sa ts'ebetso le taxonomy ho sebelisa li-database tse ngata. Tlhahisoleseding ena e sebelisetsoa ho sekaseka ka har'a mehlala ea mefuta-futa ea mefuta-futa ea alpha (alpha diversity) le lipakeng tsa mefuta-futa ea mehlala (mefuta-futa ea beta). Tlhahlobo e fapaneng pakeng tsa lihlopha e fumana li-OTU le mesebetsi ea likokoana-hloko tse fapaneng pakeng tsa lihlopha tse peli tse sebelisang liteko tsa parametric le tse seng tsa parametric, ha tlhahlobo ea ho hokahanya e amana le phapang ena le maemo a tikoloho.