Takagi et al.,Joornaalka geedka, 2013
●Falanqaynta Bioinform-ka dhameystiran:Awood u siinta qiyaasta kala duwanaanta hidda-wada-hadalka, kaas oo ka tarjumaya suurtagalnimada isbeddelka noocyada, iyo muujinta xiriirkii phylogenetic la isku halleyn karo ee ka dhexeeya noocyada ku habboon abuurka isbedelka iyo isbeddelka isbarbar socda
●Falanqaynta Falanqaynta Ikhtiyaariga ah: sida qiyaasta waqtiga kala-jajabinta iyo xawaaraha ku saleysan kala duwanaanshaha heerka nucleotide iyo amino acids.
●Khibrad ballaaran iyo diiwaanno Daabacaadda: BMKGENE waxay uruursatay khibradaha ballaaran ee mashaariicda guud ee dadka iyo horumarka ka badan 15 sano, oo daboolaya kumanaan nooc, oo ay gacan ka geysteen in ka badan 1000 mashruucyo heer sare ah oo lagu daabacay suuqa dabiiciga ah, dhirta molikal-ka, joornaalka dhirta, iwm.
● Koox aad u wanaagsan oo xirfad leh iyo wareegga falanqaynta gaagaaban: waayo-aragnimo weyn oo ku saabsan falanqaynta samafalka ee horumarsan, kooxda BMKGENE GMKGENE waxay keenaysaa falanqeyn dhameystiran oo leh waqti deg deg ah oo istaagaya.
● Taageerada iibka ka dib:Balankeenna ayaa ka dheereeya dhammaystirka mashruuca ee leh muddo 3 bilood ah oo iib ah ka dib. Inta lagu jiro waqtigan, waxaan bixinaa dabagal dabagal mashruuc, gargaar dhibaatayn, iyo Q & SS & Kalfadhiyo si wax looga qabto wixii su'aalo ah ee la xiriira natiijooyinka.
Nooca isku xigxiga | Qiyaasta shacabka ee lagu taliyay | Istaraatiijiyadda isku xigta | Shuruudaha Nuclotide |
Isugeynta Genome oo dhan | ≥ 30 Shakhsiyaad, oo leh ≥ 10 qof oo ka socda koox hoosaad kasta
| 10x | U fiirsashada: ≥ 1 ng / μl Wadarta lacagta 30ng Xaddidan ama xaalufinta ama faddaraynta |
Qeyb-goyn gaar ah (SLAF) | Tooska Tooska ah: 10x Tirada calaamadaha: <400 MB: WGS waa lagu talinayaa <1GB: 100K calaamadaha 1GB > 2GB: 300K calaamadaha Max 500K calaamadaha | U fiirsashada ≥ 5 ng / μl Wadarta lacagta ≥ 80 ng Nanodrop OD260 / 280 = 1.6-2.5 Agaresol Gel: Maya ama xadidan ama faddarayn
|
Adeegga waxaa ka mid ah falanqaynta qaab dhismeedka dadka (Phylogeletic Geedka dadweynaha, shaxda Phca, shaxda ku xirnaanta dadka), kala duwanaanta dadka, iskuxirka (xulashada bulshada ee xulashada ah). Adeeggu sidoo kale waxaa ka mid ah falanqaynta loo habeeyay (tusaale, waqtiga kala-baxa, socodka hidda-wadaha).
*Natiijooyinka Demo ee halkan lagu muujiyey waxay dhammaantood ka yimaadeen Gnomes-ka oo lagu daabacay BMKGENE
1. Falanqaynta Falanqaynta waxaa ku jira Dhismaha Geedka Phylogeletic, qaab dhismeedka dadka iyo PCA-ga ku saleysan kala duwanaanshaha hidda-socodka.
Phylotenetic Geedka wuxuu matalaa cilaaqaadyo cashuureed iyo horumar leh oo ka mid ah noocyada abtirsiinyo caan ah.
PCA-ga ayaa ujeedadiisu tahay inuu u muuqdo isku soo dhawaanshaha dadka ka hooseeya dadka-hoosaadka.
Qaab-dhismeedka dadka ayaa muujinaya jiritaanka dadka ka kooban xubno gaar ah oo ka kooban kuwa ka socda dhammaantood ee loo yaqaan 'Alelle'.
Chen, et. Al.,Pnaas, 2020
2.ltlactSoltstole
Guryaha xulashada ah waxaa loola jeedaa geedi socodka ay tahay in aalluhu soo xulay oo soo noqnoqoshada heerarka dhexdhexaad ee iskuxiran ayaa la kordhiyaa oo ay yihiin kuwa goobaha la furay oo ka dhalanaya gobolka.
Ogaanshaha Genome-balaaran ee gobollada la xushay ayaa laga baaraandegayaa iyada oo la xisaabinayo iyadoo la xisaabinayo tirada dadka hidda-wadaha (π, FST, tajima oo dhan daaqad isbadal ah (100 kb) oo ah tallaabo gaar ah (10 kb).
Kala duwanaanshaha Nuclotide (π)
Tajima's d
Tusmada hagaajinta (FST)
Wu, et. Al.,Warshad molikalar, 2018 2018
3.gene socodka
Wu, et. Al.,Warshad molikalar, 2018 2018
4.Dographic Taariikhda
Zhang, et. al.,Dabeecadda dabiiciga ah & isbeddelka, 2021
5.Diverence Waqtiga
Zhang, et. al.,Dabeecadda dabiiciga ah & isbeddelka, 2021
Sahaminta horumarka ay fududeysay adeegyada hidde-ka-barashada ee BMKGE ee BMKGE-ka ee loo maro aruurinta daabacaadda daabacaadaha:
Hassanyar, Ak Et al. .Joornaalka caalamiga ah ee cilmiga molikalar, 24 (7). doi: 10.3390 / Ijmss24076238.
Chai, J. et al. (2022) 'Daahnimada duurjoogta ah, Salamam saafiga ah ee caadiga ah ee Shiinaha ayaa abuuraya fursado dhowrista cusub',Cilmi baarista zoological, 2022, vol. 43, qodobka 3, bogagga: 469-480, 43 (3), pp. 469-480. doi: 10.24272 / j.sn.2095-8137.2022.101.
Han, M. et al. (2022) Qaabka Phylogegographical iyo Tirada Dadweynaha ee EYSMUS SIBIRICUS L. On Qingahai-Tibetan Plateau ',Xuduudaha ee sayniska dhirta, 13, p. 882601. DOI: 10.3389 / FPLS.2022.882601 / Bibtex.
Wang, J. et al. (2022) 'Insights-ka galmada ee isbedelka dhaadheer ee ka yimaada urur koromosoome heer-heer-ku-meel-gaar ah oo ka mid ah deganka bulshada ee dib-u-haynta dedan',Cilmi baarista beeraha, 9. do: 10.1093 / HR / UHAC021.