Enzanisa genomices
Zvigadzirwa zvebasa
●Yakakura hunyanzvi uye zvinyorwa zvinyorwa.
●Yakakwana bioinformatics kuongororwa.
●Ane hunyanzvi bioinformatics timu uye pfupi ongororo kutenderera.
●Post-Kutengesa Tsigiro:Kuzvipira kwedu kunowedzera kupfuura purojekiti kupedzisa nemwedzi mitatu-mushure-yekutengesa basa nguva. Pakati peino nguva, isu tinopa chirongwa chekutevera-up, kugadzirisa dambudziko rekubatsira, uye Q & zvikamu zvekugadzirisa chero mibvunzo zvine chekuita nemhedzisiro.
Service Rudzidziso
| Inofungidzirwa kutendeuka-kutenderedza nguva | Nhamba yemarudzi | Zviongorori |
| Mazuva makumi matatu ekushanda | 6 - 12 | Gene Mhuri Inonamatira Gene Yemhuri Kuwedzera uye Kuparadzaniswa Phylogenic muti wekuvaka Divergence nguva yekufungidzira (fossil calibration inodiwa) Ltr yekuisa nguva (yezvirimwa) General Cuplication (yezvidyarwa) Kusarudza Kumanikidzwa Synteny Analysis |
Bioinformatics anoongorora
● Gete mhuri
● Phylogenetics
● DiverGence Nguva
● Kusarudza kumanikidzwa
● Synteny kuongorora
Mhedzisiro Inodiwa uye Kuendesa
Zvinodiwa Muenzaniso:
Tishu kana DNA yeGenome Sequencing nekereke
For tishu
| Marudzi | Tishu | Ongororo | Pacbio CCs |
| Mhuka | Visceral tishu | 0.5 ~ 1 g | ≥ 3.5 g |
| Tsandanyama tishu | |||
| ≥ 5.0 g | |||
| ≥ 5.0 ml | |||
| Mammalian Ropa | |||
| ≥ 0.5 ml | |||
| Rufu / rehove reropa | |||
| Chirimwa | Tsamba nyowani | 1 ~ 2 g | ≥ 5.0 g |
| Petal / stem | 1 ~ 2 g | ≥ 10.0 g | |
| Midzi / mbeu | 1 ~ 2 g | ≥ 20.0 g | |
| Masero | Tsika yetsika | - | ≥ 1 x 108 |
Data
Genome sequence mafaera (
Basa rebasa rinoyerera
Kuedza Dhizaini
Muenzaniso
Raibhurari Kuvaka
Kutevedzana
Kuongororwa kwedata
Mushure mekutengesa-kutengesa masevhisi
*Mhedzisiro yakaitwa pano ndeye ese kubva kuGenomes akaburitswa nebiomarker technologies
1.ltr isa nguva yekufungidzira: Iyo nhamba yakaratidza yakasarudzika Bimodal kugovera muLTR-RTS-erts nguva mukudyara rye genome, zvichienzaniswa neimwe mhando. Peakingori chichangobva kuitika pamusoro pemakore zana nemakumi mashanu apfuura.
Li guang et al.,Zvisikwa Zvemukati, 2021
2.Phylogeny uye Gete Mhuri Ongororo (Sechium Edule (Sechium Edule): Nekuongorora Kiyoyari muGumi Mhuri, Chayakote yakawanikwa yakanyanya kuwirirana neNyoka Gourd (Trichosthes Anguina). Chayakatirwa kubva kunyoka Gourd mukati megumi nematanhatu
Fu a et al.,Horticuluture Rekutsvaga, 2021
3.Synteny ongororo: Mamwe majini ane chekuita nePhytohormone mukuvandudzwa kwemichero akawanikwa muCheyote, nyoka Gourd uye squash. Kuwirirana pakati paCheyote uye squash yakakwirira zvishoma pane iyo pakati pekorafu nenyoka gourd.
Fu a et al.,Horticuluture Rekutsvaga, 2021
4.Gene Yemhuri Kuongorora: KEGG Ekuwedzera paGumi Mhuri Kuwedzera uye Kupararira muG.
Yang z et al.,BMC Biology, 2021
5.Wole genome dzidzo yekunyora: 4DTV uye KS Kugovera kuongororwa kwakaratidza zvese zvekudzora genome chiitiko. Peaks yeIntraspecies yakaratidzwa zviitiko zvekudzokorora. Peaks yeInternspecies inoratidzwa zviitiko zvekufungidzira. Ongororo yacho yakaratidza kuti ichienzanisa nemamwe marudzi matatu akabatana, O. Europaea akaenda kuburikidza nehukuru hwemageni chidzidzo zvakanyanya nguva pfupi yadarika.
Rao g et al.,Horticuluture Rekutsvaga, 2021
BMK nyaya
Ruva rikasimuka ruva: genomic insight yakabatana neyakajaira kujaira
Rakabudiswa: National Science Ongororo, 2021
SEQUFENCE STENGY:
'Basye'sHunzwi HERE'(R.Wichurainan) Genome:
Approx. 93 x Pacbio + approx. 90 x nanopori + 267 x Illumina
Kiyi mhinduro
1.high mhando r.Ichuraiwa Busco inofungidzirwa alama yaive 93,9%. Kuenzanisa ne "Blush Blush" (Haploob), mhando uye kuzere kweiyi genome yakasimbiswa neyakajeka-base gadziriso uye LTR musangano weInternet (Lai = 20.03). R.Cuzivaiana genome ine 32,674 protein coding majini.
2.multti-omtics Joint kuongorora, inosanganisira genomics, transpcertomics, qtl kuongorora kwehuwandu hwevanhu, zvakaratidza kuongorora kwakakosha pakati peR. Wichuraana uye rosa chinensis. Zvakare, chirevo chekutaura chemajini ane hukama muQtl zvaigona kunge zvichisanganiswa neStem Prickle Proterning.
Enzanisa genomics anyns pakati pebhasiwe; svutugadzike uye rosa chinensis inosanganisira Synnysis, genens uye inoparadzanisa nhamba huru yemisiyano, iyo ine hukama nehunhu hwakakosha mumaruva. Iyo yakasarudzika yekuwedzera muNAC uye Far1 / frs Gumi mhuri yaive inogona kuve yakabatana nekupokana nedare nzvimbo.
Kufananidza genomics kuongororwa pakati peBT uye Haploob genomes.
Zhong, M., et Al. "Ruva Pasina Rickle: Genomic Inshights yakabatana neyunonyora kujairana"National Science Ongororo, 2021 ;, nwab092.
